Package index • CytoScan

All functions

CytoScan(): Initialize CytoScan object

Flag(): Flag anomalies based on generated features

addReferencedata(): Add reference data to CytoScan object

addReferencelabels(): Add additional annotations for reference data

addTestdata(): Add test data to CytoScan object

addTestlabels(): Add additional annotations for test data

generateDemo(): Generate a folder with a simulated cytometry cohort

generateFeatures(): Generate features

plotBoxplot(): Plot Boxplot

plotHeatmap(): Plot heatmap

plotPCA(): Plot PCA