Flag anomalies based on generated features
Usage
Flag(
CS,
featMethod,
flagMethod,
outlier_threshold = 0.5,
novelty_threshold = 0.05
)
Arguments
- CS
CytoScan object
- featMethod
Which features to use for anomaly detection
- flagMethod
Which type of anomaly detection to use ("outlier" or "novelty")
- outlier_threshold
Isolation score threshold for outlier detection.
- novelty_threshold
GMM quantile threshold for novelty detection.
