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Plot Boxplot

Source: R/plotFunctions.R
plotBoxplot.Rd

Plot Boxplot

Usage

plotBoxplot(
  CS,
  plotData,
  channel,
  n = 1000,
  color = NULL,
  featMethod = NULL,
  nFiles = NULL
)

Arguments

CS

CytoScan object

plotData

Which data to plot based on PCA fit ("test", "reference" or "all")

n

Number of cells to sample from each file

color

Category used for color ("input", "outlier", "novelty")

featMethod

Which features to use when plotting anomalies

nFiles

Number of files to plot

Value

Boxplot